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Make delicious Pumpkin Spice Muffins with whole wheat flour, oats, and warm spices. This easy pumpkin muffin recipe uses canned pumpkin puree and takes just 30 minutes from start to finish!

Quick Recipe Overview

WHAT: Wholesome pumpkin muffins made with whole wheat flour, rolled oats, warm spices, and pumpkin puree for a hearty fall breakfast.
WHY: These easy pumpkin muffins deliver cozy autumn flavors with healthier ingredients while staying perfectly moist and delicious every time.
HOW: Mix dry ingredients, stir in wet ingredients including pumpkin puree and melted butter, then bake in a muffin tin until golden.
Table of Contents
- Quick Recipe Overview
- Why I Love Making Pumpkin Spice Muffins
- Feautured Review
- Ingredient Notes
- Popular Substitutions
- Feautured Review
- Pumpkin Spice Muffins Recipe
- How to Make Easy Pumpkin Spice Muffins
- FAQs for Pumpkin Spice Muffins
- My Best Tips for Making Pumpkin Spice Muffins
- What to Serve With Pumpkin Muffins
- Similar Recipes to Try
- Storage & Reheating Tips
- More Simple Muffin Recipes to Consider
Why I Love Making Pumpkin Spice Muffins
Long live allllllll the pumpkin recipes! I am a huge fan of these pumpkin spiced muffins and I can’t wait for you to make them, too. They are made with whole wheat flour and oatmeal, lots of pumpkin, and plenty of those fall spices that make your house smell amazing while they bake. These muffins are light, fluffy, sweet, and all around delicious.
They make the perfect breakfast, after school snack, addition to a lunchbox, or little treat to eat with a hot cup of cinnamon tea. They also freeze well which means you can make a double batch and keep some on hand for busy times.
I also like that these spicy muffins cook up great whether you’re making 12 big muffins or 18 smaller muffins – you get to choose what works best for you – just see the notes at the end of the recipe on adjusting the cooking time according to size.
Feautured Review
Vanessa Allison ⭐️⭐️⭐️⭐️⭐️
November 2, 2022
These muffins are so good! I added some dry cranberries to the recipe!very easy to make! 😌❤️

🩷 Melissa
These muffins are delicious but still jam-packed with whole grain goodness. They are perfect for snacks, lunches, get-togethers, and more.
It’s full of that classic pumpkin flavor everyone loves, especially in the fall.
And if you’re one of those people who just can’t get enough pumpkin, then this should be the first thing you bake when you’re ready to welcome fall!
Ingredient Notes
Rolled Oats: Use quick cooking rolled oats for the best texture. Old-fashioned oats work too but may create a chewier texture. Avoid instant oats as they become mushy.
Pumpkin Puree: Whether using canned pumpkin puree or making your own homemade pumpkin puree, make sure it’s pure pumpkin without added sugars or spices. The texture should be thick and smooth.
Coconut Oil: If using coconut oil instead of butter, use refined coconut oil for a neutral flavor, or unrefined for a subtle coconut note that pairs beautifully with the spices.
See the recipe card below for full information on ingredients and quantities.

Popular Substitutions
Pumpkin Spice Blend
If you don’t have all the spices called for in the recipe, you can swap out the cinnamon, nutmeg, and cloves for 1 tablespoon of pumpkin pie spice. It’s delicious either way. Pumpkin pie spice normally has the addition of allspice and ginger, both of which are delicious in this recipe.
Butter Substitutions
You can use melted butter or coconut oil in this recipe. I’m sure it would work with canola or vegetable oil, too, and I bet you could even substitute applesauce for the oil, too. So many options!
Make Dairy Free Muffins
Simply use coconut oil instead of melted butter. The flavor will be slightly different but still wonderful with those warm spices.
Chocolate Chip Addition
Fold 1 cup of chocolate chips into the batter for pumpkin chocolate chip muffins – a family favorite combination!
Nut Mix-Ins
Add ½ cup of chopped pecans or walnuts for extra crunch and richness.
Gluten Free Option
Use a 1:1 gluten free flour blend in place of whole wheat flour for gluten free muffins.
Sweetener Adjustments
Swap brown sugar for granulated sugar, coconut sugar, or even maple sugar. Each brings its own unique flavor profile.
Cream Cheese Frosting
Top cooled muffins with a simple cream cheese frosting for an extra-special treat.
Feautured Review
Tamara ⭐️⭐️⭐️⭐️⭐️
September 15, 2022
This has become a favorite muffin recipe! I use all purpose flour and 1/2 cup of cooking oil as substitutes. So yummy!

Pumpkin Spice Muffins
Ingredients
- 1 ½ cups whole wheat flour
- ½ cup quick cooking rolled oats
- 1 cup brown sugar
- 2 teaspoons baking soda
- ½ teaspoon salt
- 2 teaspoons cinnamon
- ½ teaspoon nutmeg
- ¼ teaspoon cloves
- 1 cup pumpkin puree
- ½ cup butter or coconut oil, melted
- 2 teaspoons vanilla extract
- 2 eggs
Instructions
- Preheat the oven to 350° and grease a 12-cup muffin tin well.
- In a medium mixing bowl, add the whole wheat flour, rolled oats, brown sugar, baking soda, salt, cinnamon, nutmeg, and cloves. Use a whisk to stir well to combine.
- Add the pumpkin puree, butter or coconut oil, vanilla extract, and eggs. Stir until the mixture just comes together without over-stirring.
- Add the batter to the prepared pan. Bake for 22-26 minutes or until the muffins are cooked through in the center and a toothpick inserted into the center comes out clean.
- Allow the muffins to cool for 10 minutes in the pan and then remove them from pan and let them finish cooling on a wire rack.
- Serve warm or at room temperature. Store extras in an air-tight container.
Notes
- You can use all the batter and make 12 large muffins or you can fill the muffin tins 1/2 full and get closer to 18 muffins from this recipe. Bake smaller muffins for 15-18 minutes.
- You can swap out the cinnamon, nutmeg, and cloves for 1 tablespoon of pumpkin pie spice. It’s delicious either way. Pumpkin pie spice normally has the addition of Allspice and ginger, both of which are delicious in this recipe.
- These muffins freeze really well! Let them cool completely, then store in an airtight container in the freezer for up to 3 months. Let them thaw at room temperature before eating.
- If you are a pumpkin chocolate chip fan, stir 1 cup of chocolate chips into the batter before baking.
Nutrition
How to Make Easy Pumpkin Spice Muffins
Step 1: Prep Your Workspace
Preheat your oven to 350 degrees and thoroughly grease a 12-cup muffin tin with butter or cooking spray. Make sure to get into all the corners to prevent sticking.
Step 2: Combine Dry Ingredients
In a medium mixing bowl, whisk together the whole wheat flour, rolled oats, brown sugar, baking soda, salt, cinnamon, nutmeg, and cloves until evenly distributed. This ensures your spices are spread throughout every muffin.
Step 3: Add Wet Ingredients
Add the pumpkin puree, melted butter (or coconut oil), vanilla extract, and eggs to the dry ingredients. Gently stir with a wooden spoon or spatula just until the mixture comes together – don’t overmix!
Step 4: Bake to Perfection
Divide the batter evenly among the prepared muffin cups. Bake for 22-26 minutes until the muffins are golden brown and a toothpick inserted in the center comes out clean.
Step 5: Cool and Serve
Let the muffins cool in the pan for 10 minutes, then transfer them to a wire rack. Serve warm or at room temperature – they’re delicious either way!

FAQs for Pumpkin Spice Muffins
Yes, you can substitute all-purpose flour in equal amounts. The muffins will have a lighter texture and slightly milder flavor, but they’ll still be delicious.
Canned pumpkin puree works perfectly for this recipe. Make sure you’re using pure pumpkin puree, not pumpkin pie filling which already contains sugar and spices.
Insert a toothpick into the center of a muffin – it should come out clean or with just a few moist crumbs. The tops should spring back lightly when touched.
This usually happens from over-stirring the batter. Mix just until the ingredients come together – a few lumps are perfectly fine and will result in tender muffins.

My Best Tips for Making Pumpkin Spice Muffins
☞ More Muffins: You can use all the batter and make 12 large muffins or you can fill the muffin tins halfway full and get closer to 18 muffins from this recipe. Bake smaller muffins for 15-18 minutes.
☞ Add Chocolate: Chocolate and pumpkin your jam? Feel free to fold in 1 cup of semi-sweet, milk chocolate, or mini chocolate chips to the batter before dishing it into the muffin tins.
☞ Filling Muffin Cups: For 12 bakery-style large muffins, fill each cup nearly to the top. For 18 standard muffins, fill about halfway. The batter is thick enough that it won’t overflow.
What to Serve With Pumpkin Muffins
Breakfast: These muffins pair beautifully with your morning coffee or tea. Serve them alongside scrambled eggs and crispy bacon for a complete breakfast.
They’re also wonderful with a dollop of Greek yogurt and fresh fruit for a lighter meal.
Lunch & Snacks: Try these serving ideas for lunch and snack times!
- For an afternoon snack, try spreading them with softened cream cheese or butter.
- They complement apple cider perfectly during fall gatherings.
- Kids love them in lunchboxes with a side of apple slices and cheese cubes.
Similar Recipes to Try
- Maple Sweetened Banana Muffins – Another moist, sweet muffin perfect for breakfast
- Chocolate Chip Muffins – A classic crowd-pleaser with melty chocolate
- Pumpkin Bread Style Muffins – All the pumpkin flavor with wholesome ingredients
- Apple Cinnamon Muffins – Seasonal fruit muffins with warm cinnamon
- Morning Glory Muffins – Hearty muffins packed with carrots and nuts
- Zucchini Bread Muffins – Another veggie-packed breakfast treat
Storage & Reheating Tips
Room Temperature
Store completely cooled muffins in an airtight container for up to 3 days. They stay perfectly moist without refrigeration.
Refrigerator
These muffins will keep in the fridge for up to one week in an airtight container, though they may become slightly denser.
Freezer
These freeze beautifully! Let muffins cool completely, then store in an airtight container or freezer bag for up to 3 months. Thaw at room temperature or warm briefly in the microwave.
Reheating
Microwave individual muffins for 15-20 seconds to restore that fresh-baked warmth. You can also wrap them in foil and heat in a 300-degree oven for 10 minutes.
Make Ahead
The batter can be prepared the night before and stored in the refrigerator. Bring to room temperature for 15 minutes before baking, and add 2-3 minutes to the baking time.

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These muffins are so good! I added some dry cranberries to the recipe!very easy to make! 😌❤️
Ohhh that sounds like the perfect addition, thank you for sharing!
This has become a favorite muffin recipe! I use all purpose flour and 1/2 cup of cooking oil as substitutes. So yummy!
Can all purpose flour be substituted for the wheat flour? Thank you in advance.
Yes, I do that very often with great success.